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  5. Solyc11g039785.1.1

Solyc11g039785.1.1 (CRK8, Solyc11g039785)


Aliases : CRK8, Solyc11g039785

Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 121.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g039785.1.1

Target Alias Description ECC score Gene Family Method Actions
Solyc01g067403.1.1 CRK8, Solyc01g067403 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species
Solyc04g050675.1.1 CRK8, Solyc04g050675 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species
Solyc09g064243.1.1 CRK8, Solyc09g064243 Uncharacterized mitochondrial protein AtMg00810... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!