LOC_Os11g32110 (Os11g0523800)


Aliases : Os11g0523800

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation. auxin response factor 2 (ARF2)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os11g32110

Target Alias Description ECC score Gene Family Method Actions
AT1G19850 MP, IAA24, ARF5 Transcriptional factor B3 family protein /... 0.03 Gene family
GSVIVT01008639001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
GSVIVT01023149001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
GSVIVT01035204001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os02g06910 Os02g0164900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os04g56850 Os04g0664400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os06g46410 Os06g0677800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.07 Gene family
LOC_Os12g29520 Os12g0479400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
MA_134742g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
MA_40335g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d001879 GRMZM2G078274 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d001945 GRMZM2G034840 No description available 0.03 Gene family
Zm00001d002929 GRMZM5G808366 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d011953 GRMZM2G116557 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d023659 GRMZM2G006042 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
Zm00001d026540 GRMZM2G086949 No description available 0.03 Gene family
Zm00001d026687 GRMZM2G023813 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d032683 GRMZM2G153233 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d043922 GRMZM2G437460 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 771 810
IPR010525 Auxin_resp 275 357
IPR003340 B3_DNA-bd 149 250
No external refs found!