AMTR_s00068p00103300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.52

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB3 import karyopherin


Gene families : OG_01_0002395 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002395_tree ,
OG_02_0002788 (LandPlants) Phylogenetic Tree(s): OG_02_0002788_tree ,
OG_03_0002611 (SeedPlants) Phylogenetic Tree(s): OG_03_0002611_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00103300
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AT5G19820 emb2734 ARM repeat superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00001030.13 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 Archaeplastida
Gb_38404 No alias IMB3 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
MA_10432206g0010 No alias IMB3 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
Pp3c7_4470V3.1 No alias ARM repeat superfamily protein 0.03 Archaeplastida
Solyc01g044360.4.1 No alias No annotation 0.03 Archaeplastida
AT5G19820 emb2734 ARM repeat superfamily protein 0.03 LandPlants
Gb_38404 No alias IMB3 nucleocytoplasmic import karyopherin 0.03 LandPlants
Mp3g07820.1 No alias IMB3 nucleocytoplasmic import karyopherin 0.02 LandPlants
Pp3c11_22120V3.1 No alias ARM repeat superfamily protein 0.02 LandPlants
Pp3c7_4470V3.1 No alias ARM repeat superfamily protein 0.03 LandPlants
Solyc01g044360.4.1 No alias No annotation 0.02 LandPlants
AT5G19820 emb2734 ARM repeat superfamily protein 0.03 SeedPlants
Gb_38404 No alias IMB3 nucleocytoplasmic import karyopherin 0.03 SeedPlants
Solyc01g044360.4.1 No alias No annotation 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0008565 obsolete protein transporter activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000357 HEAT 925 953
IPR001494 Importin-beta_N 42 113
No external refs found!