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  5. Solyc11g030880.1.1

Solyc11g030880.1.1 (MATR, Solyc11g030880)


Aliases : MATR, Solyc11g030880

Description : no hits & (original description: none)


Gene families : OG0003235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g030880.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00173250 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
ATMG00520 MATR Intron maturase, type II family protein 0.06 OrthoFinder output from all 47 species
Aev_g12776 MATR not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72067 MATR not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000512001 MATR No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01006203001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_17408 MATR maturase (MatR) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33956.1 MATR, LOC_Os12g33956 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MpVg00790.1 No alias No annotation 0.06 OrthoFinder output from all 47 species
Nbi_g10382 MATR not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc11g030900.1.1 MATR, Solyc11g030900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!