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  5. Solyc11g020670.1.1

Solyc11g020670.1.1 (Solyc11g020670)


Aliases : Solyc11g020670

Description : transcription factor (TCP)


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g020670.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00035550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00171910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT2G45680 No alias TCP family transcription factor 0.07 OrthoFinder output from all 47 species
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.05 OrthoFinder output from all 47 species
Adi_g060147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115586 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06733 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46523 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.03 OrthoFinder output from all 47 species
Aob_g09029 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15454 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18328 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G015000.1 Ceric.25G015000 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g06407 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.04 OrthoFinder output from all 47 species
LOC_Os02g42380.1 LOC_Os02g42380 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g43160.1 LOC_Os08g43160 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os12g07480.1 LOC_Os12g07480 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Len_g15010 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58006 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_81710g0010 No alias transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Nbi_g24235 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00471 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g50317 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g007420.2.1 Solyc05g007420 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e018800_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.02 OrthoFinder output from all 47 species
Zm00001e023066_P001 Zm00001e023066 transcription factor (TCP). CHE circadian clock repression factor 0.04 OrthoFinder output from all 47 species
Zm00001e028426_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 87 200
No external refs found!