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  5. Solyc11g020530.3.1

Solyc11g020530.3.1 (HCHIB, B-CHI,...)


Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B, Solyc11g020530

Description : no hits & (original description: none)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g020530.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G12500 HCHIB, B-CHI,... basic chitinase 0.03 OrthoFinder output from all 47 species
Adi_g040394 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26045 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32076.t1 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32079.t1 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18506 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38491 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07377 HCHIB, B-CHI,... basic chitinase *(CHIB) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01004381001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os03g04060.1 LOC_Os03g04060 Chitinase 11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os05g33130.1 HCHIB, B-CHI,... Chitinase 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g47568 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g21810.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008764 ATEP3, EP3,... not classified & original description: CDS=1-579 0.03 OrthoFinder output from all 47 species
Solyc00g500258.1.1 HCHIB, B-CHI,... Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 197.0) 0.03 OrthoFinder output from all 47 species
Solyc02g082920.4.1 HCHIB, B-CHI,... Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc10g055810.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Spa_g10006 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25258 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007716_P001 Zm00001e007716 Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 455.0) 0.03 OrthoFinder output from all 47 species
Zm00001e030152_P001 HCHIB, B-CHI,... Basic endochitinase A OS=Secale cereale... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 69 107
IPR001002 Chitin-bd_1 23 61
IPR001002 Chitin-bd_1 122 160
No external refs found!