LOC_Os11g31640 (Os11g0516000)


Aliases : Os11g0516000

Description : 11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)


Gene families : OG_01_0001567 (Gene family) Phylogenetic Tree(s): OG0001567_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os11g31640
Cluster HCCA cluster: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cre04.g230144 No alias 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.03 Gene family
GSVIVT01033008001 No alias 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.03 Gene family
MA_10853g0020 No alias 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.03 Gene family
Solyc06g030590.2.1 Solyc06g030590.2 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.03 Gene family
Zm00001d049260 GRMZM2G142030 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 101 460
No external refs found!