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  5. Solyc11g017200.2.1

Solyc11g017200.2.1 (Solyc11g017200)


Aliases : Solyc11g017200

Description : PYG7 protein involved in PS-I assembly


Gene families : OG0005614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g017200.2.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00138060 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT1G22700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012646 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Aob_g01175 No alias protein involved in PS-I assembly *(PYG7) & original... 0.04 OrthoFinder output from all 47 species
Aop_g07913 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Cba_g23451 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G019000.1 Ceric.03G019000 protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G019100.1 Ceric.03G019100 not classified & original description: pacid=50572267... 0.07 OrthoFinder output from all 47 species
Cre12.g524300 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Dcu_g08751 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
Dde_g12662 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13934 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01034503001 No alias Photosynthesis.photophosphorylation.photosystem... 0.18 OrthoFinder output from all 47 species
Gb_28677 No alias PYG7 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
LOC_Os10g32300.1 LOC_Os10g32300 PYG7 protein involved in PS-I assembly 0.09 OrthoFinder output from all 47 species
Len_g14837 No alias protein involved in PS-I assembly *(PYG7) & original... 0.07 OrthoFinder output from all 47 species
Lfl_g10429 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
MA_133089g0010 No alias PYG7 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Mp2g07550.1 No alias PYG7 protein involved in PS-I assembly 0.08 OrthoFinder output from all 47 species
Msp_g44319 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g01857 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Ore_g19021 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15480 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016391 No alias protein involved in PS-I assembly *(PYG7) & original... 0.04 OrthoFinder output from all 47 species
Sam_g38233 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
Smo90520 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Zm00001e034869_P002 Zm00001e034869 PYG7 protein involved in PS-I assembly 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!