LOC_Os03g58840.1


Description : R-SNARE component VAMP721/VAMP722 of SNARE cell-plate vesicle fusion complex. VAMP7-type R-type SNARE longin protein


Gene families : OG_01_0000293 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000293_tree ,
OG_02_0000618 (LandPlants) Phylogenetic Tree(s): OG_02_0000618_tree ,
OG_03_0000855 (SeedPlants) Phylogenetic Tree(s): OG_03_0000855_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g58840.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00183990 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
AMTR_s00032p00095920 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
AT3G54300 VAMP727, ATVAMP727 vesicle-associated membrane protein 727 0.05 Archaeplastida
Cre04.g224750 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
Cre04.g224800 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 Archaeplastida
Cre04.g225900 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
GSVIVT01028579001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Gb_17236 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
Pp3c13_7140V3.1 No alias vesicle-associated membrane protein 714 0.05 Archaeplastida
Smo170304 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Smo80138 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Solyc02g069150.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.07 Archaeplastida
Solyc11g006780.2.1 No alias VAMP7-type R-type SNARE longin protein 0.07 Archaeplastida
Zm00001e003924_P002 No alias VAMP7-type R-type SNARE longin protein 0.05 Archaeplastida
Zm00001e006043_P002 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.05 Archaeplastida
Zm00001e011409_P003 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
AMTR_s00031p00183990 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
AMTR_s00032p00095920 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
AT3G54300 VAMP727, ATVAMP727 vesicle-associated membrane protein 727 0.05 LandPlants
GSVIVT01028579001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.03 LandPlants
Pp3c12_11090V3.1 No alias vesicle-associated membrane protein 726 0.01 LandPlants
Solyc02g069150.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.05 LandPlants
Solyc11g006780.2.1 No alias VAMP7-type R-type SNARE longin protein 0.06 LandPlants
Zm00001e003924_P002 No alias VAMP7-type R-type SNARE longin protein 0.04 LandPlants
Zm00001e006043_P002 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.05 LandPlants
Zm00001e011409_P003 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 LandPlants
AMTR_s00032p00095920 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 SeedPlants
GSVIVT01028579001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 SeedPlants
Solyc02g069150.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.06 SeedPlants
Zm00001e006043_P002 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.05 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001388 Synaptobrevin 129 215
IPR010908 Longin_dom 32 111
No external refs found!