Solyc11g013000.2.1 (Solyc11g013000)


Aliases : Solyc11g013000

Description : p24-delta COPI trafficking regulator protein


Gene families : OG0001151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g013000.2.1

Target Alias Description ECC score Gene Family Method Actions
AT1G14010 No alias emp24/gp25L/p24 family/GOLD family protein 0.04 OrthoFinder output from all 47 species
AT1G57620 No alias emp24/gp25L/p24 family/GOLD family protein 0.05 OrthoFinder output from all 47 species
AT1G69460 No alias emp24/gp25L/p24 family/GOLD family protein 0.03 OrthoFinder output from all 47 species
Adi_g011270 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Adi_g049304 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Adi_g095033 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Adi_g117730 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Aop_g01040 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Aop_g03035 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000821.8 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Cre07.g315900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52920.1 LOC_Os02g52920 p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g10760.1 LOC_Os06g10760 p24-delta COPI trafficking regulator protein 0.04 OrthoFinder output from all 47 species
LOC_Os07g43890.1 LOC_Os07g43890 p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species
Msp_g07766 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Msp_g10335 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Ore_g07502 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Ore_g15724 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Pir_g02718 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Pir_g47371 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Ppi_g01939 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012264 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Smo74858 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Spa_g07345 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Tin_g03079 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e015971_P002 Zm00001e015971 p24-delta COPI trafficking regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e030800_P001 Zm00001e030800 p24-delta COPI trafficking regulator protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019008 molybdopterin synthase complex IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR009038 GOLD_dom 20 205
No external refs found!