LOC_Os03g58590.1


Description : Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 644.0)


Gene families : OG_01_0005393 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005393_tree ,
OG_02_0006070 (LandPlants) Phylogenetic Tree(s): OG_02_0006070_tree ,
OG_03_0007390 (SeedPlants) Phylogenetic Tree(s): OG_03_0007390_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g58590.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00095080 evm_27.TU.AmTr_v1... Cactin OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00021493.13 No alias Cactin OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre09.g398650 No alias Cactin OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01033725001 No alias Cactin OS=Arabidopsis thaliana 0.02 Archaeplastida
Pp3c27_420V3.1 No alias No annotation 0.05 Archaeplastida
Smo107633 No alias Cactin OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo403675 No alias Cactin OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc10g085410.3.1 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 696.0) 0.11 Archaeplastida
AMTR_s00051p00095080 evm_27.TU.AmTr_v1... Cactin OS=Arabidopsis thaliana 0.02 LandPlants
AT1G03910 No alias EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13... 0.02 LandPlants
GSVIVT01033725001 No alias Cactin OS=Arabidopsis thaliana 0.02 LandPlants
Pp3c27_420V3.1 No alias No annotation 0.05 LandPlants
Smo107633 No alias Cactin OS=Arabidopsis thaliana 0.03 LandPlants
Smo403675 No alias Cactin OS=Arabidopsis thaliana 0.02 LandPlants
Solyc10g085410.3.1 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 696.0) 0.11 LandPlants
Zm00001e006029_P001 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 708.0) 0.03 LandPlants
AMTR_s00051p00095080 evm_27.TU.AmTr_v1... Cactin OS=Arabidopsis thaliana 0.02 SeedPlants
AT1G03910 No alias EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13... 0.02 SeedPlants
GSVIVT01033725001 No alias Cactin OS=Arabidopsis thaliana 0.02 SeedPlants
Solyc10g085410.3.1 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 696.0) 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019134 Cactin_C 548 672
IPR018816 Cactin_central 195 392
No external refs found!