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  5. Solyc11g011300.2.1

Solyc11g011300.2.1 (Solyc11g011300)


Aliases : Solyc11g011300

Description : no hits & (original description: none)


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g011300.2.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00191970 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G09880 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
AT4G24430 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
AT4G38030 No alias Rhamnogalacturonate lyase family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene46069.t1 Aspi01Gene46069 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G076800.1 Ceric.18G076800 not classified & original description: pacid=50622194... 0.02 OrthoFinder output from all 47 species
Dac_g21152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006298001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g44040.1 LOC_Os08g44040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g03790.1 LOC_Os12g03790 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_228529g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g13590.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo413794 No alias No description available 0.06 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc12g088050.2.1 Solyc12g088050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 45 243
IPR029413 RG-lyase_II 398 469
IPR029411 RG-lyase_III 483 672
No external refs found!