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  5. Solyc11g011240.1.1

Solyc11g011240.1.1 (GGPS1, Solyc11g011240)


Aliases : GGPS1, Solyc11g011240

Description : isoprenyl diphosphate synthase


Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g011240.1.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G49530 GGPS6 geranylgeranyl pyrophosphate synthase 6 0.03 OrthoFinder output from all 47 species
AT2G18620 No alias Terpenoid synthases superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G18640 GGPS4 geranylgeranyl pyrophosphate synthase 4 0.02 OrthoFinder output from all 47 species
AT3G14510 No alias Polyprenyl synthetase family protein 0.04 OrthoFinder output from all 47 species
AT3G14550 GGPS3 geranylgeranyl pyrophosphate synthase 3 0.02 OrthoFinder output from all 47 species
AT3G20160 No alias Terpenoid synthases superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G29430 No alias Terpenoid synthases superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene01995.t1 GGPS1, Aspi01Gene01995 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dac_g17913 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dcu_g15213 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Gb_39712 GGPS1 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
LOC_Os07g39270.1 GGPS1, LOC_Os07g39270 isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
MA_10429756g0010 GGPS1 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
MA_138828g0010 GGPS1 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
MA_895626g0010 GGPS1 isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Pir_g57960 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Spa_g05117 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Spa_g30144 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.01 OrthoFinder output from all 47 species
Zm00001e025596_P001 GGPS1, Zm00001e025596 isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Zm00001e035362_P001 GGPS1, Zm00001e035362 isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 102 335
No external refs found!