LOC_Os03g58420.1

Description : transcription factor (WRKY)

Gene families : OG_01_0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000087 (LandPlants) Phylogenetic Tree(s): OG_02_0000087_tree ,
OG_03_0000067 (SeedPlants) Phylogenetic Tree(s): OG_03_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g58420.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00160270	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00015p00181570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
AMTR_s00019p00249020	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
AMTR_s00045p00128140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00053p00025460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00078p00123870	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.01	Archaeplastida
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.01	Archaeplastida
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.02	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.02	Archaeplastida
AT4G26440	MSP3, ATWRKY34, WRKY34	WRKY DNA-binding protein 34	0.01	Archaeplastida
AT5G07100	WRKY26	WRKY DNA-binding protein 26	0.01	Archaeplastida
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.01	Archaeplastida
AT5G24110	ATWRKY30, WRKY30	WRKY DNA-binding protein 30	0.01	Archaeplastida
GSVIVT01010525001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01020060001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01026965001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01028129001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01034148001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Gb_05176	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_25547	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_39366	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g43650.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os01g53040.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g61080.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
LOC_Os02g08440.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os03g20550.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os03g55080.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os04g51560.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os05g09020.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os05g50700.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os06g06360.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10428170g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_11492g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_212937g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp3g17660.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.01	Archaeplastida
Pp3c17_19970V3.1	No alias	WRKY DNA-binding protein 7	0.05	Archaeplastida
Pp3c3_27940V3.1	No alias	WRKY DNA-binding protein 2	0.02	Archaeplastida
Smo29146	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Smo66769	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Smo81371	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc02g032950.3.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Solyc02g071130.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc03g116890.3.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Solyc05g007110.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc06g070990.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc08g081610.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g005680.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e002502_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e005219_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e015292_P001	No alias	No annotation	0.09	Archaeplastida
Zm00001e016343_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e016623_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e017439_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e019908_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e021431_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e026554_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e027460_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e030715_P001	No alias	No annotation	0.09	Archaeplastida
Zm00001e032260_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e032453_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e038239_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.02	LandPlants
Gb_25547	No alias	transcription factor (WRKY)	0.02	LandPlants
LOC_Os05g50700.1	No alias	transcription factor (WRKY)	0.03	LandPlants
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.01	LandPlants
Pp3c17_19970V3.1	No alias	WRKY DNA-binding protein 7	0.05	LandPlants
Zm00001e030715_P001	No alias	No annotation	0.09	LandPlants
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.02	SeedPlants
Gb_25547	No alias	transcription factor (WRKY)	0.02	SeedPlants
Zm00001e030715_P001	No alias	No annotation	0.09	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	306	362
IPR018872	Zn-cluster-dom	268	302

External Links

No external refs found!

LOC_Os03g58420.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation