1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g010370.1.1

Solyc11g010370.1.1 (Solyc11g010370)


Aliases : Solyc11g010370

Description : Putative clathrin assembly protein At4g40080 OS=Arabidopsis thaliana (sp|q8l936|cap16_arath : 285.0)


Gene families : OG0003175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003175_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g010370.1.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT4G40080 No alias ENTH/ANTH/VHS superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g01441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12434 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67555.t1 Aspi01Gene67555 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G087800.1 Ceric.20G087800 not classified & original description: pacid=50566091... 0.1 OrthoFinder output from all 47 species
Ceric.21G062200.1 Ceric.21G062200 not classified & original description: pacid=50603882... 0.07 OrthoFinder output from all 47 species
Dac_g07561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007072001 No alias Putative clathrin assembly protein At4g40080... 0.03 OrthoFinder output from all 47 species
Len_g04295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435156g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_122499g0010 No alias Putative clathrin assembly protein At4g40080... 0.04 OrthoFinder output from all 47 species
Pir_g44207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 35 272
No external refs found!