Solyc11g010160.1.1 (RPM1, RPS3, Solyc11g010160)

Aliases : RPM1, RPS3, Solyc11g010160

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana (sp|q39214|rpm1_arath : 355.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g010160.1.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G58390	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.02	OrthoFinder output from all 47 species
LOC_Os06g06860.1	LOC_Os06g06860	no description available(sp\|q2r8l1\|rga5s_orysj : 290.0)	0.02	OrthoFinder output from all 47 species
LOC_Os08g14810.1	ZAR1, LOC_Os08g14810	no description available(sp\|p0do08\|pikm2_orysj : 132.0)	0.02	OrthoFinder output from all 47 species
LOC_Os11g12340.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Solyc02g084890.3.1	ZAR1, Solyc02g084890	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Solyc04g009240.2.1	RPP13, Solyc04g009240	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e011354_P001	Zm00001e011354	no description available(sp\|p0do08\|pikm2_orysj : 121.0)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041118	Rx_N	5	82
IPR002182	NB-ARC	174	416
IPR001611	Leu-rich_rpt	577	631

External Links

No external refs found!