1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g010100.2.1

Solyc11g010100.2.1 (AtRABA4a, RABA4a,...)


Aliases : AtRABA4a, RABA4a, Solyc11g010100

Description : A-class RAB GTPase


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g010100.2.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT5G65270 AtRABA4a, RABA4a RAB GTPase homolog A4A 0.04 OrthoFinder output from all 47 species
Aop_g09530 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02653 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04709 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g50060.1 RABA3, ATRAB-A3,... A-class RAB GTPase 0.07 OrthoFinder output from all 47 species
LOC_Os10g23100.1 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Lfl_g28692 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428137g0010 AtRABA4a, RABA4a A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Mp3g12050.1 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Msp_g01882 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06186 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06187 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g22760 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08199 No alias A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g079030.2.1 RABA4D,... A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Zm00001e000673_P001 AtRABA4a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e009615_P001 ATRABA4C,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e012878_P002 AtRABA4a,... A-class RAB GTPase 0.06 OrthoFinder output from all 47 species
Zm00001e038828_P001 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 19 178
No external refs found!