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  5. Solyc11g007580.3.1

Solyc11g007580.3.1 (DME, Solyc11g007580)


Aliases : DME, Solyc11g007580

Description : methylcytosine-specific DNA glycosylase (ROS1)


Gene families : OG0001282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g007580.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00215000 DME,... DNA damage response.DNA repair mechanisms.base excision... 0.02 OrthoFinder output from all 47 species
Aev_g48155 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.01 OrthoFinder output from all 47 species
Dac_g33748 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Ppi_g59851 DME methylcytosine-specific DNA glycosylase *(ROS1) &... 0.02 OrthoFinder output from all 47 species
Solyc09g009080.4.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009987 cellular process IEP HCCA
InterPro domains Description Start Stop
IPR028924 Perm-CXXC 1700 1731
IPR028925 RRM_DME 1734 1834
No external refs found!