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  5. Solyc11g007290.1.1

Solyc11g007290.1.1 (PDR11, ATPDR11, Solyc11g007290)


Aliases : PDR11, ATPDR11, Solyc11g007290

Description : subfamily ABCG transporter


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g007290.1.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 OrthoFinder output from all 47 species
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.02 OrthoFinder output from all 47 species
Aob_g22545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03117 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16447 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37548 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56716 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72848.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g41199 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76298 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22063 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25261 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05962 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031314001 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01031378001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_37006 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
MA_165288g0010 PDR1, ATPDR1 ABC transporter G family member 36 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp2g07030.1 PDR6, ATPDR6 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp4g06670.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g38848 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06663 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11856 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c23_14810V3.1 ATPDR7, PDR7,... pleiotropic drug resistance 7 0.01 OrthoFinder output from all 47 species
Ppi_g59241 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo133564 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc11g007280.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc11g067000.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g28903 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02910 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12264 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20998 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027849_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1191 1403
IPR013525 ABC_2_trans 528 740
IPR003439 ABC_transporter-like_ATP-bd 192 374
IPR003439 ABC_transporter-like_ATP-bd 894 1046
IPR029481 ABC_trans_N 116 167
IPR013581 PDR_assoc 745 811
No external refs found!