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  5. Solyc11g006720.2.1

Solyc11g006720.2.1 (Solyc11g006720)


Aliases : Solyc11g006720

Description : transcription factor (MYB-related)


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006720.2.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Aev_g02304 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aev_g30623 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aob_g16613 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Aob_g22310 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.06 OrthoFinder output from all 47 species
Aop_g01184 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g13543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ceric.11G039500.1 Ceric.11G039500 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Cre03.g198800 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dcu_g02867 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64360.1 LOC_Os01g64360 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Len_g13453 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Len_g31113 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Msp_g11983 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g113620.3.1 Solyc03g113620 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Spa_g04347 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e028675_P001 Zm00001e028675 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 119 163
IPR001005 SANT/Myb 23 66
No external refs found!