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  5. Solyc11g006675.1.1

Solyc11g006675.1.1 (PSBH, Solyc11g006675)


Aliases : PSBH, Solyc11g006675

Description : component PsbH of PS-II complex


Gene families : OG0011086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011086_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc11g006675.1.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00710 PSBH photosystem II reaction center protein H 0.23 OrthoFinder output from all 47 species
Ceric.05G041600.1 PSBH, Ceric.05G041600 component *(PsbH) of PS-II complex & original... 0.21 OrthoFinder output from all 47 species
Ceric.05G051400.1 PSBH, Ceric.05G051400 component *(PsbH) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.16G061100.1 PSBH, Ceric.16G061100 component *(PsbH) of PS-II complex & original... 0.08 OrthoFinder output from all 47 species
Ceric.29G003500.1 PSBH, Ceric.29G003500 component *(PsbH) of PS-II complex & original... 0.21 OrthoFinder output from all 47 species
Ceric.38G008300.1 PSBH, Ceric.38G008300 component *(PsbH) of PS-II complex & original... 0.21 OrthoFinder output from all 47 species
LOC_Os04g16848.1 LOC_Os04g16848 component PsbH of PS-II complex 0.06 OrthoFinder output from all 47 species
LOC_Os06g39704.1 LOC_Os06g39704 component PsbH of PS-II complex 0.06 OrthoFinder output from all 47 species
LOC_Os08g15296.1 LOC_Os08g15296 component PsbH of PS-II complex 0.12 OrthoFinder output from all 47 species
Smo187629 PSBH Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042301 phosphate ion binding IEA Interproscan
BP GO:0050821 protein stabilization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001056 PSII_PsbH 48 70
No external refs found!