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  5. Solyc11g006650.3.1

Solyc11g006650.3.1 (Solyc11g006650)


Aliases : Solyc11g006650

Description : SMXL strigolactone signal transducer


Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006650.3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252890 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.05 OrthoFinder output from all 47 species
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.05 OrthoFinder output from all 47 species
AT3G52490 No alias Double Clp-N motif-containing P-loop nucleoside... 0.13 OrthoFinder output from all 47 species
AT5G57130 No alias Clp amino terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g017569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018520 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01029304001 No alias Phytohormones.strigolactone.perception and signal... 0.03 OrthoFinder output from all 47 species
GSVIVT01033944001 No alias Phytohormones.strigolactone.perception and signal... 0.04 OrthoFinder output from all 47 species
GSVIVT01034648001 No alias Phytohormones.strigolactone.perception and signal... 0.06 OrthoFinder output from all 47 species
Gb_32222 No alias Protein SMAX1-like OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_33499 No alias SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
LOC_Os02g33460.1 LOC_Os02g33460 SMXL strigolactone signal transducer 0.05 OrthoFinder output from all 47 species
LOC_Os04g33980.1 LOC_Os04g33980 SMXL strigolactone signal transducer 0.07 OrthoFinder output from all 47 species
MA_15290g0010 No alias Protein SUPPRESSOR OF MAX2 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_800170g0010 No alias Protein SMAX1-like OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ore_g04615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008174_P001 Zm00001e008174 SMXL strigolactone signal transducer 0.08 OrthoFinder output from all 47 species
Zm00001e014748_P001 Zm00001e014748 SMXL strigolactone signal transducer 0.09 OrthoFinder output from all 47 species
Zm00001e024175_P002 Zm00001e024175 SMXL strigolactone signal transducer 0.09 OrthoFinder output from all 47 species
Zm00001e040845_P001 Zm00001e040845 SMXL strigolactone signal transducer 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 130 167
IPR004176 Clp_R_dom 23 54
No external refs found!