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  5. Solyc11g006260.2.1

Solyc11g006260.2.1 (LCR74, PDF2.5, Solyc11g006260)


Aliases : LCR74, PDF2.5, Solyc11g006260

Description : defensin (PDF2)


Gene families : OG0007968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006260.2.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT2G02100 LCR69, PDF2.2 low-molecular-weight cysteine-rich 69 0.05 OrthoFinder output from all 47 species
AT2G02120 PDF2.1, LCR70 Scorpion toxin-like knottin superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G02140 PDF2.6, LCR72 low-molecular-weight cysteine-rich 72 0.05 OrthoFinder output from all 47 species
AT2G31953 LCR76 low-molecular-weight cysteine-rich 76 0.05 OrthoFinder output from all 47 species
AT5G63660 LCR74, PDF2.5 Scorpion toxin-like knottin superfamily protein 0.07 OrthoFinder output from all 47 species
GSVIVT01010274001 No alias Defensin-like protein OS=Petunia integrifolia 0.06 OrthoFinder output from all 47 species
LOC_Os01g70680.1 LOC_Os01g70680 defensin (PDF2) 0.05 OrthoFinder output from all 47 species
LOC_Os04g11130.1 LOC_Os04g11130 defensin (PDF2) 0.05 OrthoFinder output from all 47 species
LOC_Os04g44130.1 LOC_Os04g44130 defensin (PDF2) 0.03 OrthoFinder output from all 47 species
MA_132614g0010 No alias defensin (PDF2) 0.03 OrthoFinder output from all 47 species
MA_45256g0010 No alias defensin (PDF2) 0.02 OrthoFinder output from all 47 species
MA_5320g0010 PDF2.1, LCR70 defensin (PDF1). defensin (PDF2) 0.03 OrthoFinder output from all 47 species
Solyc07g007730.4.1 LCR69, PDF2.2,... defensin (PDF2) 0.04 OrthoFinder output from all 47 species
Solyc07g007735.1.1 LCR69, PDF2.2,... defensin (PDF2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!