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  5. Solyc11g005330.2.1

Solyc11g005330.2.1 (ACT7, Solyc11g005330)


Aliases : ACT7, Solyc11g005330

Description : actin filament protein


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g005330.2.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00109910 ACT7,... Cytoskeleton.microfilament network.actin filament protein 0.06 OrthoFinder output from all 47 species
AT5G09810 ACT7 actin 7 0.09 OrthoFinder output from all 47 species
Aev_g12310 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10645 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16802 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10475 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10476 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02831 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g008983 ACT7 actin filament protein & original description: CDS=98-1231 0.04 OrthoFinder output from all 47 species
Cba_g05752 AAc1, ACT1 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10571 ACT7 actin filament protein & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g12151 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19848 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31641 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37499 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44888 AAc1, ACT1 actin filament protein & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g60033 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G028400.1 ACT7, Ceric.08G028400 actin filament protein & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000319.25 ACT11 Cytoskeleton.microfilament network.actin filament protein 0.01 OrthoFinder output from all 47 species
Dac_g04173 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09328 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19071 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21653 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003099001 ACT7 Actin-1 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
GSVIVT01026580001 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.05 OrthoFinder output from all 47 species
LOC_Os12g44350.1 ACT11, LOC_Os12g44350 actin filament protein 0.02 OrthoFinder output from all 47 species
Len_g12213 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12214 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18457 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28710 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50894 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18991 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22569 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g10990.1 ACT11 actin filament protein 0.02 OrthoFinder output from all 47 species
Mp6g11010.1 ACT7 actin filament protein 0.03 OrthoFinder output from all 47 species
Mpzg00230.1 AAc1, ACT1 actin filament protein 0.04 OrthoFinder output from all 47 species
Msp_g20173 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07984 ACT7 actin filament protein & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14230 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41937 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08921 ACT11 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08922 ACT11 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_24710V3.1 ACT7, Pp3c12_24710 actin 7 0.05 OrthoFinder output from all 47 species
Solyc10g086460.2.1 ACT4, Solyc10g086460 actin filament protein 0.04 OrthoFinder output from all 47 species
Spa_g02411 AAc1, ACT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17579 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54124 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54125 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06536 ACT7 acTin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027663_P005 ACT7, Zm00001e027663 actin filament protein 0.03 OrthoFinder output from all 47 species
Zm00001e029682_P001 ACT7, Zm00001e029682 actin filament protein 0.08 OrthoFinder output from all 47 species
Zm00001e029684_P001 ACT7, Zm00001e029684 actin filament protein 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!