1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g005000.2.1

Solyc11g005000.2.1 (Solyc11g005000)


Aliases : Solyc11g005000

Description : no hits & (original description: none)


Gene families : OG0008053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008053_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g005000.2.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00161480 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aop_g32610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0034.g025226 No alias not classified & original description: CDS=1-474 0.02 OrthoFinder output from all 47 species
Dcu_g00486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_08080 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12793 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g35542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR018614 KRTCAP2 4 114
No external refs found!