Solyc10g086530.1.1 (Solyc10g086530)


Aliases : Solyc10g086530

Description : transcription factor (GRAS)


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086530.1.1

Target Alias Description ECC score Gene Family Method Actions
AT3G46600 No alias GRAS family transcription factor 0.03 OrthoFinder output from all 47 species
AT5G59450 No alias GRAS family transcription factor 0.07 OrthoFinder output from all 47 species
Ala_g29168 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16008 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22417 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23035 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26224 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60766 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25238 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30977 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70607 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene05451.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24624.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32542.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058077 No alias GRAS-type transcription factor & original description: CDS=1-2709 0.05 OrthoFinder output from all 47 species
Azfi_s0304.g063850 No alias GRAS-type transcription factor & original description: CDS=1-2073 0.02 OrthoFinder output from all 47 species
Cba_g72741 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G070700.1 Ceric.01G070700 GRAS-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g15292 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16966 No alias GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g18741 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24896 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30355 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35554 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45854 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18847 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47760 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03966 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15158 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016522001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
MA_45656g0030 ATGRAS2, SCL14, GRAS2 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Nbi_g09779 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30389 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16061 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37898 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30100 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15428 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15664 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45113 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62859 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100200.3.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Spa_g07365 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17280 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30865 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48684 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52612 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56681 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19813 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005202 TF_GRAS 387 759
No external refs found!