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  5. Solyc10g086430.3.1

Solyc10g086430.3.1 (Solyc10g086430)


Aliases : Solyc10g086430

Description : COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana (sp|q9sy00|wdr5b_arath : 88.6)


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086430.3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268480 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.09 OrthoFinder output from all 47 species
AMTR_s00030p00138110 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5B... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00055450 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
AMTR_s00175p00024710 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.14 OrthoFinder output from all 47 species
AT3G15470 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G54200 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g036566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g013013 No alias not classified & original description: CDS=1-2577 0.02 OrthoFinder output from all 47 species
Ceric.01G113100.1 Ceric.01G113100 not classified & original description: pacid=50591929... 0.05 OrthoFinder output from all 47 species
Dac_g10987 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g45060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019618001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.05 OrthoFinder output from all 47 species
GSVIVT01034183001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.01 OrthoFinder output from all 47 species
LOC_Os03g02440.1 LOC_Os03g02440 COMPASS-like H3K4 histone methylase component WDR5A... 0.05 OrthoFinder output from all 47 species
LOC_Os11g08400.1 LOC_Os11g08400 COMPASS-like H3K4 histone methylase component WDR5B... 0.04 OrthoFinder output from all 47 species
LOC_Os12g07874.1 LOC_Os12g07874 COMPASS-like H3K4 histone methylase component WDR5B... 0.04 OrthoFinder output from all 47 species
Len_g22473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo110074 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo427312 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc07g063330.4.1 Solyc07g063330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000107_P001 Zm00001e000107 COMPASS-like H3K4 histone methylase component WDR5A... 0.05 OrthoFinder output from all 47 species
Zm00001e006528_P001 Zm00001e006528 COMPASS-like H3K4 histone methylase component WDR5B... 0.04 OrthoFinder output from all 47 species
Zm00001e039506_P002 Zm00001e039506 COMPASS-like H3K4 histone methylase component WDR5B... 0.15 OrthoFinder output from all 47 species
Zm00001e041292_P002 Zm00001e041292 COMPASS-like H3K4 histone methylase component WDR5B... 0.02 OrthoFinder output from all 47 species
Zm00001e041942_P002 Zm00001e041942 COMPASS-like H3K4 histone methylase component WDR5B... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 520 556
IPR001680 WD40_repeat 412 445
IPR001680 WD40_repeat 561 598
IPR001680 WD40_repeat 696 732
No external refs found!