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  5. Solyc10g086370.1.1

Solyc10g086370.1.1 (RGA, RGA1, Solyc10g086370)


Aliases : RGA, RGA1, Solyc10g086370

Description : DELLA-type gibberellin signal transducer. transcription factor (GRAS). transcription factor (DELLA)


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086370.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270570 RGL2,... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
Als_g26688 RGA2, GAI transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32212.t1 RGL1, RGL,... GRAS-type transcription factor *(RAD1) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene35127.t1 RGA2, GAI,... transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029812 RGL2 GRAS-type transcription factor & original description: CDS=1-2046 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036465 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-2091 0.03 OrthoFinder output from all 47 species
Dac_g09377 RGA2, GAI transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25487 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g50393 RGL2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14093 RGA2, GAI transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011710001 RGA, RGA1 RNA biosynthesis.transcriptional activation.GRAS... 0.05 OrthoFinder output from all 47 species
Gb_32252 RGA, RGA1 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os11g31100.1 RGL1, RGL, LOC_Os11g31100 DELLA-type gibberellin signal transducer. transcription... 0.01 OrthoFinder output from all 47 species
MA_10428503g0020 RGA2, GAI transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Msp_g37454 RGA2, GAI GRAS-type transcription factor *(RAD1) & original... 0.01 OrthoFinder output from all 47 species
Ore_g03910 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g26688 RGA, RGA1 GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g27974 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g29064 SCR, SGR1 GRAS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g33996 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.02 OrthoFinder output from all 47 species
Solyc03g110950.1.1 RGA2, GAI, Solyc03g110950 transcription factor (GRAS). RAD1 GRAS-type transcription factor 0.11 OrthoFinder output from all 47 species
Solyc10g086380.1.1 RGA2, GAI, Solyc10g086380 DELLA-type gibberellin signal transducer. transcription... 0.05 OrthoFinder output from all 47 species
Zm00001e005412_P001 RGA, RGA1, Zm00001e005412 DELLA-type gibberellin signal transducer. transcription... 0.01 OrthoFinder output from all 47 species
Zm00001e020330_P001 RGA2, GAI, Zm00001e020330 DELLA-type gibberellin signal transducer. transcription... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005202 TF_GRAS 139 505
No external refs found!