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  5. Solyc10g086160.1.1

Solyc10g086160.1.1 (OMR1, Solyc10g086160)


Aliases : OMR1, Solyc10g086160

Description : no description available(sp|a0fke6|td1_sollc : 229.0)


Gene families : OG0002979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086160.1.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Aev_g20964 OMR1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G053600.1 OMR1, Ceric.27G053600 EC_4.3 carbon-nitrogen lyase & original description:... 0.02 OrthoFinder output from all 47 species
Pnu_g08960 OMR1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g083540.3.1 OMR1, Solyc10g083540 threonine deaminase. threonine dehydratase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001721 TD_ACT-like 139 179
No external refs found!