Solyc10g084380.1.1 (WRKY4, Solyc10g084380)

Aliases : WRKY4, Solyc10g084380

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g084380.1.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00067720	WRKY48,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00012p00243090	WRKY49,...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	OrthoFinder output from all 47 species
AMTR_s00053p00216970	WRKY43,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00089p00116260	AtWRKY20,...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00089p00116340	WRKY2, ATWRKY2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00156p00038330	WRKY9, ATWRKY9,...	RNA biosynthesis.transcriptional activation.WRKY...	0.07	OrthoFinder output from all 47 species
AT1G29860	ATWRKY71, WRKY71	WRKY DNA-binding protein 71	0.04	OrthoFinder output from all 47 species
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	OrthoFinder output from all 47 species
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.03	OrthoFinder output from all 47 species
Adi_g117326	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117756	AtWRKY20, WRKY20	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene30007.t1	ATWRKY45,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene46328.t1	ATWRKY13,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g010734	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: CDS=1-1518	0.04	OrthoFinder output from all 47 species
Cba_g64876	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g68331	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g18032	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g19081	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011356001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01020864001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01037686001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
LOC_Os01g09100.1	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g74140.1	WRKY49,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os04g46060.1	LOC_Os04g46060	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g45230.1	WRKY43,...	transcription factor (WRKY)	0.07	OrthoFinder output from all 47 species
Lfl_g09064	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g19632	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434450g0010	WRKY49, ATWRKY49	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_125146g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_23415g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_7513437g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Pir_g27505	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26988	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g45089	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g058540.3.1	WRKY48,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc03g095770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Tin_g20358	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027460_P001	WRKY56,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e029092_P002	ATWRKY24,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e032189_P001	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	341	397
IPR003657	WRKY_dom	149	204

External Links

No external refs found!

Solyc10g084380.1.1 (WRKY4, Solyc10g084380)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation