Solyc10g083730.2.1 (PP2-A15, AtPP2-A15,...)


Aliases : PP2-A15, AtPP2-A15, Solyc10g083730

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g083730.2.1

Target Alias Description ECC score Gene Family Method Actions
AT3G61060 AtPP2-A13, PP2-A13 phloem protein 2-A13 0.02 OrthoFinder output from all 47 species
AT5G52120 PP2-A14, AtPP2-A14 phloem protein 2-A14 0.04 OrthoFinder output from all 47 species
Aev_g17366 AtPP2-B1, PP2-B1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g29100 PP2-A15, AtPP2-A15 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g19128 PP2-A15, AtPP2-A15 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010614001 PP2-A11, AtPP2-A11 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os02g56820.1 MEE66, LOC_Os02g56820 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g05480.1 AtPP2-B1,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g15141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g26057 AtPP2-B1, PP2-B1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35801 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g17453 AtPP2-A13, PP2-A13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002143_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.06 OrthoFinder output from all 47 species
Zm00001e023222_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e023618_P002 ATPP2-B11,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 114 283
No external refs found!