LOC_Os11g29380 (Os11g0484300)


Aliases : Os11g0484300

Description : 28.1 DNA.synthesis/chromatin structure Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function. MINICHROMOSOME MAINTENANCE 2 (MCM2)


Gene families : OG_01_0005111 (Gene family) Phylogenetic Tree(s): OG0005111_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os11g29380
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G44900 MCM2, ATMCM2 minichromosome maintenance (MCM2/3/5) family protein 0.19 Gene family
Cpa|evm.model.tig00020554.77 No alias 28.1 DNA.synthesis/chromatin structure Encodes MCM2... 0.04 Gene family
Cre07.g338000 No alias 28.1 DNA.synthesis/chromatin structure Encodes MCM2... 0.08 Gene family
GSVIVT01001119001 No alias 28.1 DNA.synthesis/chromatin structure Encodes MCM2... 0.1 Gene family
MA_10431703g0010 No alias 28.1 DNA.synthesis/chromatin structure Encodes MCM2... 0.1 Gene family
Smo88537 PACid_15407070 28.1 DNA.synthesis/chromatin structure Encodes MCM2... 0.03 Gene family
Solyc11g040120.2.1 Solyc11g040120.2 28.1 DNA.synthesis/chromatin structure Encodes MCM2... 0.11 Gene family
Zm00001d049190 GRMZM2G139894 28.1 DNA.synthesis/chromatin structure Encodes MCM2... 0.15 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006270 DNA replication initiation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008045 MCM2 49 221
IPR033762 MCM_OB 344 471
IPR027925 MCM_N 245 338
IPR001208 MCM_dom 512 734
No external refs found!