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  5. Solyc10g081650.2.1

Solyc10g081650.2.1 (CRTISO, CCR2, Solyc10g081650)


Aliases : CRTISO, CCR2, Solyc10g081650

Description : carotenoid isomerase (CrtISO)


Gene families : OG0006448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g081650.2.1

Target Alias Description ECC score Gene Family Method Actions
Cre16.g651923 CRTISO, CCR2 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Dac_g31065 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47618 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g14940 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17393 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09774 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 107 587
No external refs found!