Solyc10g081240.3.1 (EMB1241, Solyc10g081240)

Aliases : EMB1241, Solyc10g081240

Description : nucleotide exchange factor (CGE)

Gene families : OG0003073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003073_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g081240.3.1
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00133730	EMB1241,...	No description available	0.07	OrthoFinder output from all 47 species
AT1G36390	No alias	Co-chaperone GrpE family protein	0.07	OrthoFinder output from all 47 species
AT5G17710	EMB1241	Co-chaperone GrpE family protein	0.08	OrthoFinder output from all 47 species
Adi_g058809	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g105047	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g26465	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g68101	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.07	OrthoFinder output from all 47 species
Azfi_s0090.g042634	EMB1241	nucleotide exchange factor *(CGE) & original...	0.03	OrthoFinder output from all 47 species
Cba_g23471	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G065300.1	EMB1241, Ceric.14G065300	nucleotide exchange factor *(CGE) & original...	0.07	OrthoFinder output from all 47 species
Cre07.g341600	EMB1241	No description available	0.06	OrthoFinder output from all 47 species
Ehy_g05527	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008951001	No alias	No description available	0.1	OrthoFinder output from all 47 species
LOC_Os02g39870.1	EMB1241, LOC_Os02g39870	nucleotide exchange factor (CGE)	0.07	OrthoFinder output from all 47 species
LOC_Os04g35180.2	LOC_Os04g35180	nucleotide exchange factor (CGE)	0.04	OrthoFinder output from all 47 species
Lfl_g01090	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432146g0010	EMB1241	nucleotide exchange factor (CGE)	0.05	OrthoFinder output from all 47 species
Mp4g18970.1	EMB1241	nucleotide exchange factor (CGE)	0.08	OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024029	EMB1241	nucleotide exchange factor *(CGE) & original...	0.06	OrthoFinder output from all 47 species
Smo83859	EMB1241	No description available	0.11	OrthoFinder output from all 47 species
Spa_g06560	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g24979	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e008098_P001	Zm00001e008098	nucleotide exchange factor (CGE)	0.09	OrthoFinder output from all 47 species
Zm00001e015084_P001	EMB1241, Zm00001e015084	nucleotide exchange factor (CGE)	0.11	OrthoFinder output from all 47 species
Zm00001e022956_P001	EMB1241, Zm00001e022956	nucleotide exchange factor (CGE)	0.12	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006457	protein folding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0051087	chaperone binding	IEA	Interproscan
MF	GO:0060590	ATPase regulator activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000740	GrpE	186	341

External Links

No external refs found!

Solyc10g081240.3.1 (EMB1241, Solyc10g081240)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation