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  5. Solyc10g081170.2.1

Solyc10g081170.2.1 (CAM3, acam-3, Solyc10g081170)


Aliases : CAM3, acam-3, Solyc10g081170

Description : Calmodulin-related protein OS=Petunia hybrida (sp|p27164|calm3_pethy : 247.0)


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g081170.2.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00113890 CAM3, acam-3,... Calmodulin OS=Medicago sativa 0.04 OrthoFinder output from all 47 species
Aev_g26311 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g28698 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31402 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05627.t1 CAM3, acam-3,... calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10403.t1 CAM3, acam-3,... calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29308.t1 ACAM-6, CAM6,... calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.121 ACAM-6, CAM6 Calmodulin OS=Chlamydomonas reinhardtii 0.01 OrthoFinder output from all 47 species
Cre01.g051250 CEN2, CEN1, ATCEN2 Dynein 18 kDa light chain, flagellar outer arm... 0.02 OrthoFinder output from all 47 species
Dde_g01248 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19236 ATCAL5, CAM2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06394 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018070001 CML11 Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01025831001 CAM3, acam-3 Calmodulin OS=Lilium longiflorum 0.07 OrthoFinder output from all 47 species
Gb_17936 CAM3, acam-3 Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 246.0) 0.04 OrthoFinder output from all 47 species
Gb_20553 ACAM-2, CAM5 Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g59530.1 ACAM-2, CAM5,... Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os12g41110.1 ACAM-6, CAM6,... Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g58839 TCH1, CAM1, ACAM-1 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13233 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18118 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020783 ACAM-6, CAM6 calcium sensor *(CML) & original description: CDS=16-546 0.02 OrthoFinder output from all 47 species
Sam_g12806 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56917 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009213_P001 ACAM-2, CAM5,... Putative calmodulin-like protein 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 146
IPR002048 EF_hand_dom 12 73
No external refs found!