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  5. Solyc10g080880.2.1

Solyc10g080880.2.1 (ATPIN1, PIN1, Solyc10g080880)


Aliases : ATPIN1, PIN1, Solyc10g080880

Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g080880.2.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene22307.t2 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0215.g058367 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.04G080600.1 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g06420 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06199 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
MA_61553g0020 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Msp_g01195 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g40682 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11165 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005827 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.01 OrthoFinder output from all 47 species
Solyc01g068410.4.1 PIN5, Solyc01g068410 auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
Zm00001e024071_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e036089_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 581
No external refs found!