- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ACT11, Solyc10g080500
Description : actin filament protein
Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g080500.2.1 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00131p00109910 | ACT7,... | Cytoskeleton.microfilament network.actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104499 | ACT7 | actin filament protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene11271.t1 | ACT7, Aspi01Gene11271 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g008983 | ACT7 | actin filament protein & original description: CDS=98-1231 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0157.g053800 | ACT7 | actin filament protein & original description: CDS=361-1494 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G061600.1 | ACT7, Ceric.19G061600 | actin filament protein & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G034800.1 | ACT7, Ceric.27G034800 | actin filament protein & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09029 | ACT7 | actin filament protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Gb_24792 | AAc1, ACT1 | actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g61970.1 | ACT7, LOC_Os03g61970 | actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06963 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_135063g0010 | ACT7 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
| MA_96086g0010 | ACT7 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g32127 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40371 | No alias | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009080_P001 | ACT7, Zm00001e009080 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027663_P005 | ACT7, Zm00001e027663 | actin filament protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004000 | Actin | 5 | 377 |
| No external refs found! |