Solyc10g079990.3.1 (Solyc10g079990)

Aliases : Solyc10g079990

Description : Transcription initiation factor IIB-2 OS=Arabidopsis thaliana (sp|q9ss44|tf2b2_arath : 271.0)

Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g079990.3.1
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AT2G41630	TFIIB	transcription factor IIB	0.04	OrthoFinder output from all 47 species
Pnu_g07607	No alias	basal transcription factor *(TFIIb) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e010238_P001	Zm00001e010238	basal transcription factor (TFIIb)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
MF	GO:0017025	TBP-class protein binding	IEA	Interproscan
MF	GO:0140296	general transcription initiation factor binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013150	TFIIB_cyclin	5	54

External Links

No external refs found!