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  5. Solyc10g079750.2.1

Solyc10g079750.2.1 (BOP2, Solyc10g079750)


Aliases : BOP2, Solyc10g079750

Description : transcriptional co-activator (BOP)


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g079750.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00115370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
AT3G57130 BOP1 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.04 OrthoFinder output from all 47 species
AT4G26120 No alias Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene24037.t1 BOP2, Aspi01Gene24037 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42280.t1 BOP2, Aspi01Gene42280 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013694 BOP2 not classified & original description: CDS=1-1683 0.03 OrthoFinder output from all 47 species
Dac_g28815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033571001 BOP2 RNA biosynthesis.transcriptional activation.bZIP... 0.06 OrthoFinder output from all 47 species
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species
Nbi_g03720 BOP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10052 BOP1 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008213 No alias not classified & original description: CDS=1-2121 0.03 OrthoFinder output from all 47 species
Spa_g51802 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018649_P001 BOP2, Zm00001e018649 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Zm00001e024092_P001 BOP2, Zm00001e024092 BTB/POZ domain and ankyrin repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e028331_P001 BOP2, Zm00001e028331 transcriptional co-activator (BOP) 0.04 OrthoFinder output from all 47 species
Zm00001e028982_P001 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 262 344
IPR000210 BTB/POZ_dom 17 113
IPR024228 NPR_central_dom 200 256
No external refs found!