1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g079420.1.1

Solyc10g079420.1.1 (Solyc10g079420)


Aliases : Solyc10g079420

Description : Probable calcium-binding protein CML36 OS=Arabidopsis thaliana (sp|q9ss31|cml36_arath : 154.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g079420.1.1

Target Alias Description ECC score Gene Family Method Actions
AT5G37770 TCH2, CML24 EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33679 TCH2, CML24 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57972 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33148 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24003 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03899 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g04360.1 LOC_Os12g04360 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g12526 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 66 124
IPR002048 EF_hand_dom 138 201
No external refs found!