Solyc10g077080.3.1 (ASD1, ATASD1, ARAF,...)

Aliases : ASD1, ATASD1, ARAF, ARAF1, Solyc10g077080

Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)

Gene families : OG0002834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002834_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g077080.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT5G26120	ATASD2, ASD2	alpha-L-arabinofuranosidase 2	0.07	OrthoFinder output from all 47 species
LOC_Os11g03780.2	ASD1, ATASD1,...	bifunctional alpha-L-arabinofuranosidase and...	0.03	OrthoFinder output from all 47 species
Len_g02872	ASD1, ATASD1, ARAF, ARAF1	bifunctional alpha-L-arabinofuranosidase and...	0.02	OrthoFinder output from all 47 species
MA_527284g0010	ASD1, ATASD1, ARAF, ARAF1	Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e011000_P001	ASD1, ATASD1,...	bifunctional alpha-L-arabinofuranosidase and...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0019566	arabinose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046373	L-arabinose metabolic process	IEA	Interproscan
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010720	Alpha-L-AF_C	460	644

External Links

No external refs found!