LOC_Os03g56950.2


Description : transcription factor (bHLH). PIF red/far-red light perception transcriptional regulator


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0015558 (LandPlants) Phylogenetic Tree(s): OG_02_0015558_tree ,
OG_03_0015250 (SeedPlants) Phylogenetic Tree(s): OG_03_0015250_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g56950.2
Cluster HCCA: Cluster_344

Target Alias Description ECC score Gene Family Method Actions
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01007914001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.04 Archaeplastida
GSVIVT01030846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
LOC_Os12g40590.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os12g40730.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c1_38820V3.1 No alias phytochrome interacting factor 3 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.05 Archaeplastida
Zm00001e020477_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e005873_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 LandPlants
Zm00001e011920_P001 No alias no description available(sp|q10ch5|pil13_orysj : 121.0) 0.03 LandPlants
Zm00001e005873_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 SeedPlants
Zm00001e011920_P001 No alias no description available(sp|q10ch5|pil13_orysj : 121.0) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 235 281
No external refs found!