Solyc10g075030.3.1 (HSL1, VAL2, HSI2-L1,...)

Aliases : HSL1, VAL2, HSI2-L1, Solyc10g075030

Description : transcription factor (LAV-VAL)

Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g075030.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00266720	HSL1, VAL2,...	RNA biosynthesis.transcriptional activation.B3...	0.04	OrthoFinder output from all 47 species
Cba_g07416	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g46046	HSI2, VAL1	LAV-VAL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.1Z276200.1	HSL1, VAL2,...	LAV-VAL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pir_g47703	HSI2, VAL1	LAV-VAL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	322	422
IPR011124	Znf_CW	591	633

External Links

No external refs found!