Solyc10g054560.2.1 (Solyc10g054560)

Aliases : Solyc10g054560

Description : subunit c of V-type ATPase membrane V0 subcomplex

Gene families : OG0000979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g054560.2.1
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AT1G19910	AVA-2PE, AVA-P2, ATVHA-C2	ATPase, F0/V0 complex, subunit C protein	0.05	OrthoFinder output from all 47 species
AT1G75630	AVA-P4	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	0.04	OrthoFinder output from all 47 species
AT4G34720	ATVHA-C1, AVA-P1, VHA-C1	ATPase, F0/V0 complex, subunit C protein	0.03	OrthoFinder output from all 47 species
AT4G38920	VHA-C3, AVA-P3, ATVHA-C3	vacuolar-type H(+)-ATPase C3	0.09	OrthoFinder output from all 47 species
Adi_g012522	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.06	OrthoFinder output from all 47 species
Adi_g039991	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Adi_g128872	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Adi_g128873	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ala_g16546	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Aop_g01495	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Aop_g03676	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Aop_g11476	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0005.g008961	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0129.g048983	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Cba_g16333	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ceric.02G027800.1	Ceric.02G027800	subunit c of V-type ATPase membrane V0 subcomplex &...	0.07	OrthoFinder output from all 47 species
Cre06.g257450	No alias	Solute transport.primary active transport.V-type ATPase...	0.07	OrthoFinder output from all 47 species
Dac_g15494	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Dcu_g05181	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.1	OrthoFinder output from all 47 species
GSVIVT01009832001	No alias	Solute transport.primary active transport.V-type ATPase...	0.05	OrthoFinder output from all 47 species
Gb_10787	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex	0.05	OrthoFinder output from all 47 species
LOC_Os05g01560.1	LOC_Os05g01560	subunit c of V-type ATPase membrane V0 subcomplex	0.09	OrthoFinder output from all 47 species
LOC_Os11g06890.1	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.07	OrthoFinder output from all 47 species
LOC_Os12g07140.1	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.04	OrthoFinder output from all 47 species
MA_69456g0010	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex	0.02	OrthoFinder output from all 47 species
Mp5g20810.1	No alias	subunit c of V-type ATPase membrane V0 subcomplex	0.04	OrthoFinder output from all 47 species
Mp8g11230.1	No alias	subunit c of V-type ATPase membrane V0 subcomplex	0.03	OrthoFinder output from all 47 species
Msp_g03776	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Nbi_g18732	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Nbi_g32124	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ore_g35017	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.06	OrthoFinder output from all 47 species
Pnu_g24852	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002635	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Spa_g01896	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Spa_g06323	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.06	OrthoFinder output from all 47 species
Spa_g41557	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Zm00001e009048_P001	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.05	OrthoFinder output from all 47 species
Zm00001e018436_P001	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.05	OrthoFinder output from all 47 species
Zm00001e024502_P002	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.07	OrthoFinder output from all 47 species
Zm00001e029675_P001	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.05	OrthoFinder output from all 47 species
Zm00001e039470_P001	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEA	Interproscan
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006848	pyruvate transport	IEP	HCCA
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015718	monocarboxylic acid transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
BP	GO:1901475	pyruvate transmembrane transport	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
BP	GO:1990542	mitochondrial transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002379	ATPase_proteolipid_c-like_dom	96	154
IPR002379	ATPase_proteolipid_c-like_dom	16	75

External Links

No external refs found!

Solyc10g054560.2.1 (Solyc10g054560)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation