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  5. Solyc10g050105.1.1

Solyc10g050105.1.1 (KOM, Solyc10g050105)


Aliases : KOM, Solyc10g050105

Description : no hits & (original description: none)


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g050105.1.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Adi_g108065 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01691 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03692.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0183.g056478 RBL1, ATRBL1 protease *(RBL) & original description: CDS=777-1763 0.05 OrthoFinder output from all 47 species
Dac_g04619 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12621 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06776 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species
LOC_Os10g37760.1 RBL2, ATRBL2,... protease (RBL) 0.06 OrthoFinder output from all 47 species
MA_128457g0010 RBL2, ATRBL2 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g19500 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00696 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003245_P001 RBL3, ATRBL3,... protease (RBL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 43 89
No external refs found!