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  5. Solyc10g049750.3.1

Solyc10g049750.3.1 (Solyc10g049750)


Aliases : Solyc10g049750

Description : chromatin remodeling factor (Rad5-like)


Gene families : OG0002085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g049750.3.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012700001 No alias No description available 0.06 OrthoFinder output from all 47 species
Len_g14364 No alias chromatin remodeling factor *(Rad5-like) & original... 0.02 OrthoFinder output from all 47 species
Solyc05g044480.3.1 Solyc05g044480 chromatin remodeling factor (Rad5-like) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 719 833
IPR027370 Znf-RING_euk 636 673
IPR000330 SNF2_N 185 469
No external refs found!