AMTR_s00068p00064720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.26

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS30 component


Gene families : OG_01_0003752 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003752_tree ,
OG_02_0003387 (LandPlants) Phylogenetic Tree(s): OG_02_0003387_tree ,
OG_03_0004145 (SeedPlants) Phylogenetic Tree(s): OG_03_0004145_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00064720
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT4G29390 No alias Ribosomal protein S30 family protein 0.03 Archaeplastida
AT5G56670 No alias Ribosomal protein S30 family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Gb_23464 No alias component RPS30 of SSU proteome 0.03 Archaeplastida
LOC_Os02g56014.1 No alias component RPS30 of SSU proteome 0.04 Archaeplastida
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.04 Archaeplastida
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.02 Archaeplastida
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.05 Archaeplastida
Pp3c2_28870V3.1 No alias Ribosomal protein S30 family protein 0.03 Archaeplastida
Pp3c2_29010V3.1 No alias Ribosomal protein S30 family protein 0.04 Archaeplastida
Pp3c7_26650V3.1 No alias Ribosomal protein S30 family protein 0.02 Archaeplastida
Solyc08g076340.3.1 No alias component RPS30 of SSU proteome 0.09 Archaeplastida
Solyc12g008700.3.1 No alias component RPS30 of SSU proteome 0.02 Archaeplastida
AT4G29390 No alias Ribosomal protein S30 family protein 0.03 LandPlants
AT5G56670 No alias Ribosomal protein S30 family protein 0.03 LandPlants
Gb_23464 No alias component RPS30 of SSU proteome 0.03 LandPlants
LOC_Os02g56014.1 No alias component RPS30 of SSU proteome 0.04 LandPlants
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.04 LandPlants
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.02 LandPlants
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.05 LandPlants
Pp3c1_420V3.1 No alias Ribosomal protein S30 family protein 0.02 LandPlants
Pp3c2_28870V3.1 No alias Ribosomal protein S30 family protein 0.02 LandPlants
Pp3c2_29010V3.1 No alias Ribosomal protein S30 family protein 0.04 LandPlants
Pp3c7_26650V3.1 No alias Ribosomal protein S30 family protein 0.02 LandPlants
Solyc08g076340.3.1 No alias component RPS30 of SSU proteome 0.09 LandPlants
Solyc12g008700.3.1 No alias component RPS30 of SSU proteome 0.02 LandPlants
AT4G29390 No alias Ribosomal protein S30 family protein 0.03 SeedPlants
AT5G56670 No alias Ribosomal protein S30 family protein 0.03 SeedPlants
Gb_23464 No alias component RPS30 of SSU proteome 0.03 SeedPlants
LOC_Os02g56014.1 No alias component RPS30 of SSU proteome 0.04 SeedPlants
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.03 SeedPlants
Solyc08g076340.3.1 No alias component RPS30 of SSU proteome 0.09 SeedPlants
Solyc12g008700.3.1 No alias component RPS30 of SSU proteome 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 60
No external refs found!