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  5. Solyc10g045310.2.1

Solyc10g045310.2.1 (Solyc10g045310)


Aliases : Solyc10g045310

Description : no hits & (original description: none)


Gene families : OG0003008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g045310.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00041870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G29400 No alias Protein of unknown function (DUF3531) 0.11 OrthoFinder output from all 47 species
AT5G08400 No alias Protein of unknown function (DUF3531) 0.09 OrthoFinder output from all 47 species
Aob_g23123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010808 No alias not classified & original description: CDS=177-1064 0.03 OrthoFinder output from all 47 species
Azfi_s0207.g057900 No alias not classified & original description: CDS=92-976 0.03 OrthoFinder output from all 47 species
Ceric.14G067200.1 Ceric.14G067200 not classified & original description: pacid=50634031... 0.05 OrthoFinder output from all 47 species
GSVIVT01034332001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_14630 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os01g37820.1 LOC_Os01g37820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g58120.1 LOC_Os02g58120 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp8g04100.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ppi_g48354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo74924 No alias No description available 0.03 OrthoFinder output from all 47 species
Tin_g00575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027738_P003 Zm00001e027738 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021920 DUF3531 119 260
No external refs found!