Solyc10g038175.1.1 (ORF240B, Solyc10g038175)


Aliases : ORF240B, Solyc10g038175

Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 131.0)


Gene families : OG0000011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g038175.1.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g018167 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019483 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058569 ORF240B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086407 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086859 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30877 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34003 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63639 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03111.t1 CRK8, Aspi01Gene03111 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03259.t1 ORF240B, Aspi01Gene03259 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene03620.t1 CRK8, Aspi01Gene03620 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05114.t1 Aspi01Gene05114 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05170.t1 ORF240B, Aspi01Gene05170 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05772.t1 CRK8, Aspi01Gene05772 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05907.t1 CRK8, Aspi01Gene05907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06458.t1 CRK8, Aspi01Gene06458 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08023.t1 ORF240B, Aspi01Gene08023 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09983.t1 Aspi01Gene09983 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15006.t1 CRK8, Aspi01Gene15006 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16104.t1 CRK8, Aspi01Gene16104 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17759.t1 Aspi01Gene17759 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene17979.t1 CRK8, Aspi01Gene17979 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18644.t2 Aspi01Gene18644 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene19629.t1 Aspi01Gene19629 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene20662.t1 MAB1, Aspi01Gene20662 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene20848.t2 Aspi01Gene20848 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene21665.t1 ORF240B, Aspi01Gene21665 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24720.t1 ORF145A, Aspi01Gene24720 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25098.t1 Aspi01Gene25098 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25686.t1 CRK8, Aspi01Gene25686 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26944.t1 Aspi01Gene26944 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29398.t1 Aspi01Gene29398 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene29782.t1 Aspi01Gene29782 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31557.t1 Aspi01Gene31557 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35262.t1 Aspi01Gene35262 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35359.t1 CRCK1, Aspi01Gene35359 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Aspi01Gene35808.t1 Aspi01Gene35808 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36335.t1 ORF240B, Aspi01Gene36335 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37964.t1 Aspi01Gene37964 catalytic protein *(MurB) of UDP-N-acetylmuramic acid... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38707.t1 Aspi01Gene38707 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40021.t1 CRK8, Aspi01Gene40021 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40605.t1 CRK8, Aspi01Gene40605 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40681.t1 Aspi01Gene40681 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55131.t1 ORF240B, Aspi01Gene55131 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55594.t1 Aspi01Gene55594 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene56015.t1 ORF240B, Aspi01Gene56015 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60204.t1 Aspi01Gene60204 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60206.t1 Aspi01Gene60206 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene62009.t1 CRK8, Aspi01Gene62009 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62210.t1 ORF240B, Aspi01Gene62210 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63465.t1 Aspi01Gene63465 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene69037.t1 CRK8, Aspi01Gene69037 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G105800.1 Ceric.04G105800 not classified & original description: pacid=50632384... 0.02 OrthoFinder output from all 47 species
Ceric.19G006000.1 Ceric.19G006000 not classified & original description: pacid=50575287... 0.04 OrthoFinder output from all 47 species
Ceric.36G066700.1 Ceric.36G066700 not classified & original description: pacid=50568105... 0.01 OrthoFinder output from all 47 species
Dde_g45029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29946 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_18099 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Len_g14231 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g58035 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_17250V3.1 Pp3c16_17250 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Pp3c23_18690V3.1 Pp3c23_18690 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Pp3c24_6880V3.1 Pp3c24_6880 No annotation 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 2 111
No external refs found!