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  5. Solyc10g018380.3.1

Solyc10g018380.3.1 (Solyc10g018380)


Aliases : Solyc10g018380

Description : Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata (sp|o50046|trpb_camac : 194.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 186.4)


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g018380.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G54810 TRP2, TSB1, ATTSB1, TRPB tryptophan synthase beta-subunit 1 0.02 OrthoFinder output from all 47 species
Mp4g12300.1 TRP2, TSB1, ATTSB1, TRPB subunit beta of tryptophan synthase complex 0.04 OrthoFinder output from all 47 species
Spa_g10445 TSB2 EC_4.2 carbon-oxygen lyase & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 28 133
No external refs found!